Index
B
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C
|
D
|
F
|
G
|
H
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I
|
J
|
K
|
L
|
M
|
O
|
P
|
R
|
S
|
W
B
BaseAPIClient (class in reana_commons.api_client)
BaseConsumer (class in reana_commons.consumer)
BasePublisher (class in reana_commons.publisher)
build_caching_info_message() (in module reana_commons.utils)
build_progress_message() (in module reana_commons.utils)
build_unique_component_name() (in module reana_commons.utils)
C
calculate_file_access_time() (in module reana_commons.utils)
calculate_hash_of_dir() (in module reana_commons.utils)
calculate_job_input_hash() (in module reana_commons.utils)
check_connection_to_job_controller() (in module reana_commons.utils)
check_htcondor_max_runtime() (in module reana_commons.serial)
check_if_cached() (reana_commons.api_client.JobControllerAPIClient method)
check_status() (reana_commons.api_client.JobControllerAPIClient method)
click_table_printer() (in module reana_commons.utils)
close() (reana_commons.publisher.BasePublisher method)
COMMAND_DANGEROUS_OPERATIONS (in module reana_commons.config)
copy_openapi_specs() (in module reana_commons.utils)
create_api_client() (in module reana_commons.k8s.api_client)
create_cvmfs_persistent_volume_claim() (in module reana_commons.k8s.volumes)
D
default_workspace() (in module reana_commons.config)
DEFAULT_WORKSPACE_PATH (in module reana_commons.config)
F
format_cmd() (in module reana_commons.utils)
G
get_consumers() (reana_commons.consumer.BaseConsumer method)
get_current_api_client() (in module reana_commons.api_client)
get_disk_usage() (in module reana_commons.utils)
get_disk_usage_info_paths() (in module reana_commons.utils)
get_files_recursive_wildcard() (in module reana_commons.utils)
get_k8s_cvmfs_volumes() (in module reana_commons.k8s.volumes)
get_logs() (reana_commons.api_client.JobControllerAPIClient method)
get_quota_resource_usage() (in module reana_commons.utils)
get_reana_shared_volume() (in module reana_commons.k8s.volumes)
get_shared_volume() (in module reana_commons.k8s.volumes)
get_usage_percentage() (in module reana_commons.utils)
get_workflow_status_change_verb() (in module reana_commons.utils)
get_workspace_volume() (in module reana_commons.k8s.volumes)
H
HTCONDOR_JOB_FLAVOURS (in module reana_commons.config)
I
INTERACTIVE_SESSION_TYPES (in module reana_commons.config)
is_directory() (in module reana_commons.utils)
J
JobControllerAPIClient (class in reana_commons.api_client)
K
K8S_CERN_EOS_AVAILABLE (in module reana_commons.config)
K8S_CERN_EOS_MOUNT_CONFIGURATION (in module reana_commons.config)
K8S_USE_SECURITY_CONTEXT (in module reana_commons.config)
KRB5_CONFIGMAP_NAME (in module reana_commons.config)
KRB5_CONTAINER_IMAGE (in module reana_commons.config)
KRB5_INIT_CONTAINER_NAME (in module reana_commons.config)
KRB5_RENEW_CONTAINER_NAME (in module reana_commons.config)
KRB5_STATUS_FILE_CHECK_INTERVAL (in module reana_commons.config)
KRB5_STATUS_FILE_LOCATION (in module reana_commons.config)
KRB5_TICKET_RENEW_INTERVAL (in module reana_commons.config)
KRB5_TOKEN_CACHE_FILENAME (in module reana_commons.config)
KRB5_TOKEN_CACHE_LOCATION (in module reana_commons.config)
KUBERNETES_MEMORY_FORMAT (in module reana_commons.config)
KUBERNETES_MEMORY_UNITS (in module reana_commons.config)
kubernetes_node_label_to_dict() (in module reana_commons.config)
L
load() (reana_commons.config.REANAConfig class method)
M
MissingAPIClientConfiguration
module
reana_commons.api_client
reana_commons.config
reana_commons.consumer
reana_commons.errors
reana_commons.k8s.api_client
reana_commons.k8s.volumes
reana_commons.publisher
reana_commons.serial
reana_commons.utils
MQ_CONNECTION_STRING (in module reana_commons.config)
MQ_DEFAULT_EXCHANGE (in module reana_commons.config)
MQ_DEFAULT_FORMAT (in module reana_commons.config)
MQ_DEFAULT_QUEUES (in module reana_commons.config)
MQ_HOST (in module reana_commons.config)
MQ_MAX_PRIORITY (in module reana_commons.config)
MQ_PASS (in module reana_commons.config)
MQ_PORT (in module reana_commons.config)
MQ_PRODUCER_MAX_RETRIES (in module reana_commons.config)
MQ_USER (in module reana_commons.config)
O
on_message() (reana_commons.consumer.BaseConsumer method)
OPENAPI_SPECS (in module reana_commons.config)
P
publish_workflow_status() (reana_commons.publisher.WorkflowStatusPublisher method)
publish_workflow_submission() (reana_commons.publisher.WorkflowSubmissionPublisher method)
R
reana_commons.api_client
module
reana_commons.config
module
reana_commons.consumer
module
reana_commons.errors
module
reana_commons.k8s.api_client
module
reana_commons.k8s.volumes
module
reana_commons.publisher
module
reana_commons.serial
module
reana_commons.utils
module
REANA_COMPONENT_NAMING_SCHEME (in module reana_commons.config)
REANA_COMPONENT_PREFIX (in module reana_commons.config)
REANA_COMPONENT_PREFIX_ENVIRONMENT (in module reana_commons.config)
REANA_COMPONENT_TYPES (in module reana_commons.config)
REANA_COMPUTE_BACKENDS (in module reana_commons.config)
REANA_CVMFS_PVC (in module reana_commons.config)
REANA_CVMFS_PVC_NAME (in module reana_commons.config)
REANA_CVMFS_STORAGE_CLASS_NAME (in module reana_commons.config)
REANA_DEFAULT_SNAKEMAKE_ENV_IMAGE (in module reana_commons.config)
REANA_INFRASTRUCTURE_COMPONENTS (in module reana_commons.config)
REANA_INFRASTRUCTURE_COMPONENTS_HOSTNAMES (in module reana_commons.config)
REANA_INFRASTRUCTURE_KUBERNETES_NAMESPACE (in module reana_commons.config)
REANA_INFRASTRUCTURE_KUBERNETES_SERVICEACCOUNT_NAME (in module reana_commons.config)
REANA_JOB_CONTROLLER_CONNECTION_CHECK_SLEEP (in module reana_commons.config)
REANA_JOB_HOSTPATH_MOUNTS (in module reana_commons.config)
REANA_LOG_FORMAT (in module reana_commons.config)
REANA_LOG_LEVEL (in module reana_commons.config)
REANA_MAX_CONCURRENT_BATCH_WORKFLOWS (in module reana_commons.config)
REANA_RESOURCE_HEALTH_COLORS (in module reana_commons.config)
REANA_RUNTIME_BATCH_KUBERNETES_NODE_LABEL (in module reana_commons.config)
REANA_RUNTIME_JOBS_KUBERNETES_NODE_LABEL (in module reana_commons.config)
REANA_RUNTIME_KUBERNETES_KEEP_ALIVE_JOBS_WITH_STATUSES (in module reana_commons.config)
REANA_RUNTIME_KUBERNETES_NAMESPACE (in module reana_commons.config)
REANA_RUNTIME_KUBERNETES_SERVICEACCOUNT_NAME (in module reana_commons.config)
REANA_RUNTIME_SESSIONS_KUBERNETES_NODE_LABEL (in module reana_commons.config)
REANA_SHARED_PVC_NAME (in module reana_commons.config)
REANA_STORAGE_BACKEND (in module reana_commons.config)
REANA_USER_SECRET_MOUNT_PATH (in module reana_commons.config)
REANA_WORKFLOW_ENGINES (in module reana_commons.config)
REANA_WORKFLOW_NAME_ILLEGAL_CHARACTERS (in module reana_commons.config)
REANA_WORKFLOW_UMASK (in module reana_commons.config)
reana_yaml_schema_file_path (in module reana_commons.config)
REANAConfig (class in reana_commons.config)
REANAConfigDoesNotExist
REANAEmailNotificationError
REANAJobControllerSubmissionError
REANAKubernetesMemoryLimitExceeded
REANAKubernetesWrongMemoryFormat
REANAMissingWorkspaceError
REANAQuotaExceededError
REANASecretAlreadyExists
REANASecretDoesNotExist
REANAValidationError
REANAWorkspaceError
remove_upper_level_references() (in module reana_commons.utils)
run_command() (in module reana_commons.utils)
S
serial_load() (in module reana_commons.serial)
SHARED_VOLUME_PATH (in module reana_commons.config)
submit() (reana_commons.api_client.JobControllerAPIClient method)
W
WORKFLOW_RUNTIME_GROUP_NAME (in module reana_commons.config)
WORKFLOW_RUNTIME_USER_GID (in module reana_commons.config)
WORKFLOW_RUNTIME_USER_NAME (in module reana_commons.config)
WORKFLOW_RUNTIME_USER_UID (in module reana_commons.config)
WORKFLOW_TIME_FORMAT (in module reana_commons.config)
WorkflowStatusPublisher (class in reana_commons.publisher)
WorkflowSubmissionPublisher (class in reana_commons.publisher)
WORKSPACE_PATHS (in module reana_commons.config)
workspaces() (in module reana_commons.config)